Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Uhrf1Q8VDF2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Uhrf1Q8VDF2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Gm11355-201ENSMUST00000121120 306 ntBASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Uhrf1Q8VDF2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Uhrf1Q8VDF2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Gm18669-201ENSMUST00000216049 778 ntBASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Uhrf1Q8VDF2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Uhrf1Q8VDF2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Uhrf1Q8VDF2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms