Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Gm10698-201ENSMUST00000182663 604 ntBASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Gm8520-201ENSMUST00000186517 868 ntBASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpap2Q8VC34 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Gm43183-201ENSMUST00000200632 547 ntBASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
Rpap2Q8VC34 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rpap2Q8VC34 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Gm27011-201ENSMUST00000182352 972 ntBASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.34■□□□□ 0.69
Rpap2Q8VC34 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpap2Q8VC34 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.33■□□□□ 0.69
Rpap2Q8VC34 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.33■□□□□ 0.69
Rpap2Q8VC34 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpap2Q8VC34 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpap2Q8VC34 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpap2Q8VC34 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpap2Q8VC34 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpap2Q8VC34 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpap2Q8VC34 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.32■□□□□ 0.68
Rpap2Q8VC34 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpap2Q8VC34 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpap2Q8VC34 Gm12382-201ENSMUST00000122005 922 ntBASIC19.32■□□□□ 0.68
Rpap2Q8VC34 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpap2Q8VC34 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rpap2Q8VC34 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpap2Q8VC34 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpap2Q8VC34 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpap2Q8VC34 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.31■□□□□ 0.68
Rpap2Q8VC34 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms