Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc9Q8VC31 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc9Q8VC31 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc9Q8VC31 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Ccdc9Q8VC31 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Ccdc9Q8VC31 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Ccdc9Q8VC31 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc9Q8VC31 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc9Q8VC31 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc9Q8VC31 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms