Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Mir5122-201ENSMUST00000175004 89 ntBASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3kbp1Q8R550 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3kbp1Q8R550 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Fst-202ENSMUST00000223640 2612 ntBASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh3kbp1Q8R550 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3kbp1Q8R550 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Sh3kbp1Q8R550 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3kbp1Q8R550 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sh3kbp1Q8R550 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sh3kbp1Q8R550 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Gm38285-201ENSMUST00000192928 922 ntBASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Gm43183-201ENSMUST00000200632 547 ntBASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms