Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ubqln1Q8R317 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubqln1Q8R317 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubqln1Q8R317 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubqln1Q8R317 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Mtag2-201ENSMUST00000058665 714 ntBASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubqln1Q8R317 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubqln1Q8R317 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubqln1Q8R317 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubqln1Q8R317 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Ubqln1Q8R317 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Gm10418-201ENSMUST00000100943 576 ntBASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Mir6349-201ENSMUST00000184059 97 ntBASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubqln1Q8R317 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.7■□□□□ 0.26
Ubqln1Q8R317 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Gm12527-201ENSMUST00000117967 564 ntBASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Gm13158-201ENSMUST00000122007 736 ntBASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Ubqln1Q8R317 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Gm27275-201ENSMUST00000184318 272 ntBASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubqln1Q8R317 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Mir2861-201ENSMUST00000175539 82 ntBASIC16.67■□□□□ 0.26
Ubqln1Q8R317 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubqln1Q8R317 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms