Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r28Q8R2C9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vmn1r28Q8R2C9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vmn1r28Q8R2C9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Vmn1r28Q8R2C9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r28Q8R2C9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Grk6-206ENSMUST00000224995 2971 ntBASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vmn1r28Q8R2C9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Vmn1r28Q8R2C9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r28Q8R2C9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r28Q8R2C9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms