Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp7Q8R1T1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chmp7Q8R1T1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Chmp7Q8R1T1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chmp7Q8R1T1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chmp7Q8R1T1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC22.58■■□□□ 1.21
Chmp7Q8R1T1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chmp7Q8R1T1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chmp7Q8R1T1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
Chmp7Q8R1T1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Chmp7Q8R1T1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Chmp7Q8R1T1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Chmp7Q8R1T1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Chmp7Q8R1T1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Chmp7Q8R1T1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Gm25016-201ENSMUST00000158399 131 ntBASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Gm7370-201ENSMUST00000219471 767 ntBASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp7Q8R1T1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Gm37025-201ENSMUST00000195159 829 ntBASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Gm9731-201ENSMUST00000209480 747 ntBASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp7Q8R1T1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Gm14859-201ENSMUST00000117752 357 ntBASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp7Q8R1T1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp7Q8R1T1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms