Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.67■□□□□ 0.42
Nudcd3Q8R1N4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd3Q8R1N4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd3Q8R1N4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nudcd3Q8R1N4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nudcd3Q8R1N4 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd3Q8R1N4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd3Q8R1N4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms