Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Gm12933-201ENSMUST00000120203 872 ntBASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cchcr1Q8K2I2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Cchcr1Q8K2I2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cchcr1Q8K2I2 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cchcr1Q8K2I2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cchcr1Q8K2I2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cchcr1Q8K2I2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cchcr1Q8K2I2 Gm11927-201ENSMUST00000118472 759 ntBASIC20.83■□□□□ 0.93
Cchcr1Q8K2I2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.83■□□□□ 0.93
Cchcr1Q8K2I2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cchcr1Q8K2I2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cchcr1Q8K2I2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cchcr1Q8K2I2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cchcr1Q8K2I2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cchcr1Q8K2I2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.83■□□□□ 0.92
Cchcr1Q8K2I2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cchcr1Q8K2I2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cchcr1Q8K2I2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cchcr1Q8K2I2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cchcr1Q8K2I2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cchcr1Q8K2I2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms