Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc47a1Q8K0H1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slc47a1Q8K0H1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc47a1Q8K0H1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc47a1Q8K0H1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Slc47a1Q8K0H1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc47a1Q8K0H1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.39■□□□□ 0.38
Slc47a1Q8K0H1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc47a1Q8K0H1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc47a1Q8K0H1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Gm13148-201ENSMUST00000118892 745 ntBASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc47a1Q8K0H1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Gm12441-201ENSMUST00000121806 588 ntBASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc47a1Q8K0H1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Gm22325-201ENSMUST00000158904 308 ntBASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc47a1Q8K0H1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Slc47a1Q8K0H1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc47a1Q8K0H1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc47a1Q8K0H1 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.35■□□□□ 0.37
Slc47a1Q8K0H1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc47a1Q8K0H1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms