Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20■□□□□ 0.79
Syne4Q8CII8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Syne4Q8CII8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Syne4Q8CII8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Syne4Q8CII8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Syne4Q8CII8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.99■□□□□ 0.79
Syne4Q8CII8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Gm44771-201ENSMUST00000206975 626 ntBASIC19.99■□□□□ 0.79
Syne4Q8CII8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne4Q8CII8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.98■□□□□ 0.79
Syne4Q8CII8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Gm10566-201ENSMUST00000086739 996 ntBASIC19.98■□□□□ 0.79
Syne4Q8CII8 BC021767-201ENSMUST00000126387 1716 ntBASIC19.98■□□□□ 0.79
Syne4Q8CII8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.98■□□□□ 0.79
Syne4Q8CII8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Tgds-204ENSMUST00000228543 1594 ntBASIC19.97■□□□□ 0.79
Syne4Q8CII8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.97■□□□□ 0.79
Syne4Q8CII8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Gm18958-201ENSMUST00000174258 762 ntBASIC19.97■□□□□ 0.79
Syne4Q8CII8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.97■□□□□ 0.79
Syne4Q8CII8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.97■□□□□ 0.79
Syne4Q8CII8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne4Q8CII8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Gm6623-201ENSMUST00000173570 544 ntBASIC19.95■□□□□ 0.78
Syne4Q8CII8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Syne4Q8CII8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.94■□□□□ 0.78
Syne4Q8CII8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Gm27742-201ENSMUST00000184667 60 ntBASIC19.94■□□□□ 0.78
Syne4Q8CII8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne4Q8CII8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Syne4Q8CII8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms