Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sox30Q8CGW4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox30Q8CGW4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Gm10849-201ENSMUST00000100397 618 ntBASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Gm26524-201ENSMUST00000192339 390 ntBASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sox30Q8CGW4 Flg-201ENSMUST00000050758 1488 ntBASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox30Q8CGW4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox30Q8CGW4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Sox30Q8CGW4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox30Q8CGW4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sox30Q8CGW4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox30Q8CGW4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox30Q8CGW4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox30Q8CGW4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox30Q8CGW4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox30Q8CGW4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms