Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Timm23-208ENSMUST00000226683 750 ntBASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rbm28Q8CGC6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbm28Q8CGC6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Gm6433-201ENSMUST00000118634 875 ntBASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Gm30025-201ENSMUST00000218555 728 ntBASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbm28Q8CGC6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rbm28Q8CGC6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.83■□□□□ 0.92
Rbm28Q8CGC6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.83■□□□□ 0.92
Rbm28Q8CGC6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Rbm28Q8CGC6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rbm28Q8CGC6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbm28Q8CGC6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Tgds-204ENSMUST00000228543 1594 ntBASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Gm3375-201ENSMUST00000203929 796 ntBASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rbm28Q8CGC6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms