Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.19■□□□□ 0.82
Smc2Q8CG48 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Gm11927-201ENSMUST00000118472 759 ntBASIC20.19■□□□□ 0.82
Smc2Q8CG48 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Gm2559-201ENSMUST00000201323 363 ntBASIC20.19■□□□□ 0.82
Smc2Q8CG48 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smc2Q8CG48 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.18■□□□□ 0.82
Smc2Q8CG48 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc2Q8CG48 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.17■□□□□ 0.82
Smc2Q8CG48 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
Smc2Q8CG48 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Gm4968-201ENSMUST00000071458 858 ntBASIC20.16■□□□□ 0.82
Smc2Q8CG48 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.16■□□□□ 0.82
Smc2Q8CG48 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.16■□□□□ 0.82
Smc2Q8CG48 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc2Q8CG48 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Gm29791-202ENSMUST00000207888 369 ntBASIC20.15■□□□□ 0.82
Smc2Q8CG48 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc2Q8CG48 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc2Q8CG48 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc2Q8CG48 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms