Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Smc4Q8CG47 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smc4Q8CG47 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Gm27463-201ENSMUST00000183569 57 ntBASIC21.76■■□□□ 1.07
Smc4Q8CG47 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Gm13559-201ENSMUST00000120476 863 ntBASIC21.75■■□□□ 1.07
Smc4Q8CG47 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.74■■□□□ 1.07
Smc4Q8CG47 Gm11539-201ENSMUST00000119837 557 ntBASIC21.74■■□□□ 1.07
Smc4Q8CG47 Gm13436-201ENSMUST00000120418 567 ntBASIC21.74■■□□□ 1.07
Smc4Q8CG47 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.72■■□□□ 1.07
Smc4Q8CG47 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms