Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Smc4Q8CG47 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smc4Q8CG47 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Gm27463-201ENSMUST00000183569 57 ntBASIC21.76■■□□□ 1.07
Smc4Q8CG47 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Smc4Q8CG47 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Gm13559-201ENSMUST00000120476 863 ntBASIC21.75■■□□□ 1.07
Smc4Q8CG47 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc4Q8CG47 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.74■■□□□ 1.07
Smc4Q8CG47 Gm11539-201ENSMUST00000119837 557 ntBASIC21.74■■□□□ 1.07
Smc4Q8CG47 Gm13436-201ENSMUST00000120418 567 ntBASIC21.74■■□□□ 1.07
Smc4Q8CG47 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc4Q8CG47 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc4Q8CG47 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.72■■□□□ 1.07
Smc4Q8CG47 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc4Q8CG47 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms