Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Gm27275-201ENSMUST00000184318 272 ntBASIC18.19■□□□□ 0.5
Snx30Q8CE50 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx30Q8CE50 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Gm11249-201ENSMUST00000117071 859 ntBASIC18.18■□□□□ 0.5
Snx30Q8CE50 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.18■□□□□ 0.5
Snx30Q8CE50 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.18■□□□□ 0.5
Snx30Q8CE50 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx30Q8CE50 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Snx30Q8CE50 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx30Q8CE50 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.16■□□□□ 0.5
Snx30Q8CE50 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Gm37856-201ENSMUST00000191634 999 ntBASIC18.16■□□□□ 0.5
Snx30Q8CE50 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Snx30Q8CE50 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.15■□□□□ 0.5
Snx30Q8CE50 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.15■□□□□ 0.5
Snx30Q8CE50 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Mtag2-201ENSMUST00000058665 714 ntBASIC18.15■□□□□ 0.5
Snx30Q8CE50 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.15■□□□□ 0.5
Snx30Q8CE50 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx30Q8CE50 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Snx30Q8CE50 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snx30Q8CE50 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Snx30Q8CE50 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx30Q8CE50 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx30Q8CE50 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx30Q8CE50 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms