Protein–RNA interactions for Protein: Q8CDK1

Gm5591, Predicted gene 5591, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5591Q8CDK1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Gm17808-201ENSMUST00000200859 894 ntBASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5591Q8CDK1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.77■□□□□ 0.59
Gm5591Q8CDK1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm5591Q8CDK1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Gm5591Q8CDK1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Gm17807-201ENSMUST00000186869 298 ntBASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5591Q8CDK1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 Gm28033-201ENSMUST00000184224 96 ntBASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5591Q8CDK1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5591Q8CDK1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Gm11355-201ENSMUST00000121120 306 ntBASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5591Q8CDK1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Gm5591Q8CDK1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5591Q8CDK1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms