Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ufl1Q8CCJ3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ufl1Q8CCJ3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Ufl1Q8CCJ3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Gm7638-201ENSMUST00000121348 967 ntBASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ufl1Q8CCJ3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Idnk-204ENSMUST00000226010 1898 ntBASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ufl1Q8CCJ3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ufl1Q8CCJ3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ufl1Q8CCJ3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
Ufl1Q8CCJ3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ufl1Q8CCJ3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ufl1Q8CCJ3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Gm45058-201ENSMUST00000205810 766 ntBASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Gm7791-201ENSMUST00000219066 539 ntBASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ufl1Q8CCJ3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Gm2274-201ENSMUST00000184539 609 ntBASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ufl1Q8CCJ3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms