Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Gm10418-201ENSMUST00000100943 576 ntBASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Gm3375-201ENSMUST00000203929 796 ntBASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 Gm13401-201ENSMUST00000117074 291 ntBASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf31Q8CCF0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Gm12085-201ENSMUST00000119263 940 ntBASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Gm29791-202ENSMUST00000207888 369 ntBASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf31Q8CCF0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Gm4974-201ENSMUST00000209974 875 ntBASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Gm30025-201ENSMUST00000218555 728 ntBASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf31Q8CCF0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf31Q8CCF0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf31Q8CCF0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf31Q8CCF0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf31Q8CCF0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf31Q8CCF0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf31Q8CCF0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf31Q8CCF0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms