Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc46a2Q8CA03 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc46a2Q8CA03 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc46a2Q8CA03 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc46a2Q8CA03 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.96■□□□□ 0.31
Slc46a2Q8CA03 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.96■□□□□ 0.31
Slc46a2Q8CA03 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc46a2Q8CA03 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc46a2Q8CA03 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.96■□□□□ 0.3
Slc46a2Q8CA03 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc46a2Q8CA03 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc46a2Q8CA03 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc46a2Q8CA03 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc46a2Q8CA03 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc46a2Q8CA03 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms