Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx6Q8C7R7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx6Q8C7R7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx6Q8C7R7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx6Q8C7R7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.9■□□□□ 0.46
Rfx6Q8C7R7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx6Q8C7R7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms