Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Gm18025-201ENSMUST00000221733 862 ntBASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim9Q8C7M3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Gm18666-201ENSMUST00000190039 958 ntBASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.45■□□□□ 0.7
Trim9Q8C7M3 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim9Q8C7M3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim9Q8C7M3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Gm6576-201ENSMUST00000169678 883 ntBASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Gm42545-201ENSMUST00000202755 922 ntBASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim9Q8C7M3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms