Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Gm10013-201ENSMUST00000106074 672 ntBASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Gm13401-201ENSMUST00000117074 291 ntBASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Gm24841-201ENSMUST00000158676 357 ntBASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
4933409G03RikQ8C5U0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933409G03RikQ8C5U0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933409G03RikQ8C5U0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
4933409G03RikQ8C5U0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
4933409G03RikQ8C5U0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
4933409G03RikQ8C5U0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933409G03RikQ8C5U0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933409G03RikQ8C5U0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.13■□□□□ 0.65
4933409G03RikQ8C5U0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
4933409G03RikQ8C5U0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
4933409G03RikQ8C5U0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933409G03RikQ8C5U0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933409G03RikQ8C5U0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Gm7638-201ENSMUST00000121348 967 ntBASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Gm18032-201ENSMUST00000222541 538 ntBASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933409G03RikQ8C5U0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Gm16061-201ENSMUST00000122167 857 ntBASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Gm13474-201ENSMUST00000122466 815 ntBASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
4933409G03RikQ8C5U0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
4933409G03RikQ8C5U0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933409G03RikQ8C5U0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933409G03RikQ8C5U0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933409G03RikQ8C5U0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
4933409G03RikQ8C5U0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms