Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Mir2861-201ENSMUST00000175539 82 ntBASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptcd1Q8C2E4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptcd1Q8C2E4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptcd1Q8C2E4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Gm28033-201ENSMUST00000184224 96 ntBASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptcd1Q8C2E4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Gm16061-201ENSMUST00000122167 857 ntBASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptcd1Q8C2E4 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.67■■□□□ 1.06
Ptcd1Q8C2E4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptcd1Q8C2E4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptcd1Q8C2E4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ptcd1Q8C2E4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptcd1Q8C2E4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd1Q8C2E4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.66■■□□□ 1.06
Ptcd1Q8C2E4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.66■■□□□ 1.06
Ptcd1Q8C2E4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd1Q8C2E4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.66■■□□□ 1.06
Ptcd1Q8C2E4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptcd1Q8C2E4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Gm17807-201ENSMUST00000186869 298 ntBASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptcd1Q8C2E4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptcd1Q8C2E4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptcd1Q8C2E4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Gm5587-201ENSMUST00000206270 674 ntBASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ptcd1Q8C2E4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms