Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ska3Q8C263 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ska3Q8C263 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ska3Q8C263 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ska3Q8C263 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ska3Q8C263 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ska3Q8C263 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ska3Q8C263 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ska3Q8C263 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Ska3Q8C263 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ska3Q8C263 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ska3Q8C263 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ska3Q8C263 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ska3Q8C263 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.57■□□□□ 0.24
Ska3Q8C263 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ska3Q8C263 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.57■□□□□ 0.24
Ska3Q8C263 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ska3Q8C263 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ska3Q8C263 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ska3Q8C263 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ska3Q8C263 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ska3Q8C263 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Ska3Q8C263 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ska3Q8C263 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Gm15378-201ENSMUST00000121894 207 ntBASIC16.56■□□□□ 0.24
Ska3Q8C263 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.56■□□□□ 0.24
Ska3Q8C263 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ska3Q8C263 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.56■□□□□ 0.24
Ska3Q8C263 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ska3Q8C263 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.55■□□□□ 0.24
Ska3Q8C263 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.55■□□□□ 0.24
Ska3Q8C263 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.55■□□□□ 0.24
Ska3Q8C263 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ska3Q8C263 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ska3Q8C263 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ska3Q8C263 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Gm22240-201ENSMUST00000175225 82 ntBASIC16.54■□□□□ 0.24
Ska3Q8C263 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 Gm18025-201ENSMUST00000221733 862 ntBASIC16.54■□□□□ 0.24
Ska3Q8C263 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.54■□□□□ 0.24
Ska3Q8C263 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ska3Q8C263 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ska3Q8C263 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ska3Q8C263 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.53■□□□□ 0.24
Ska3Q8C263 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ska3Q8C263 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ska3Q8C263 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Gm11643-201ENSMUST00000119578 864 ntBASIC16.53■□□□□ 0.24
Ska3Q8C263 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.53■□□□□ 0.24
Ska3Q8C263 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.53■□□□□ 0.24
Ska3Q8C263 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ska3Q8C263 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ska3Q8C263 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ska3Q8C263 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ska3Q8C263 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms