Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Gm22325-201ENSMUST00000158904 308 ntBASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps9d1Q8C190 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps9d1Q8C190 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps9d1Q8C190 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps9d1Q8C190 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps9d1Q8C190 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Vps9d1Q8C190 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
Vps9d1Q8C190 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps9d1Q8C190 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps9d1Q8C190 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps9d1Q8C190 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps9d1Q8C190 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps9d1Q8C190 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms