Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim47Q8C0E3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim47Q8C0E3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim47Q8C0E3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Trim47Q8C0E3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim47Q8C0E3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Gm12085-201ENSMUST00000119263 940 ntBASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim47Q8C0E3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Gm10418-201ENSMUST00000100943 576 ntBASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Gm4974-201ENSMUST00000209974 875 ntBASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim47Q8C0E3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Timm23-208ENSMUST00000226683 750 ntBASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim47Q8C0E3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Gm3375-201ENSMUST00000203929 796 ntBASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Odf3b-204ENSMUST00000227834 930 ntBASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim47Q8C0E3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim47Q8C0E3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim47Q8C0E3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim47Q8C0E3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trim47Q8C0E3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Mir7071-201ENSMUST00000184847 69 ntBASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms