Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.24■□□□□ 0.03
Trank1Q8BV79 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.24■□□□□ 0.03
Trank1Q8BV79 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trank1Q8BV79 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trank1Q8BV79 Olfr129-201ENSMUST00000122318 993 ntBASIC15.23■□□□□ 0.03
Trank1Q8BV79 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trank1Q8BV79 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Gm24841-201ENSMUST00000158676 357 ntBASIC15.22■□□□□ 0.03
Trank1Q8BV79 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trank1Q8BV79 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trank1Q8BV79 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trank1Q8BV79 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.21■□□□□ 0.02
Trank1Q8BV79 Mir770-201ENSMUST00000103252 94 ntBASIC15.21■□□□□ 0.02
Trank1Q8BV79 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trank1Q8BV79 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trank1Q8BV79 Gm13401-201ENSMUST00000117074 291 ntBASIC15.21■□□□□ 0.02
Trank1Q8BV79 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trank1Q8BV79 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trank1Q8BV79 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trank1Q8BV79 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trank1Q8BV79 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trank1Q8BV79 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.2■□□□□ 0.02
Trank1Q8BV79 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Gm28659-201ENSMUST00000188013 759 ntBASIC15.2■□□□□ 0.02
Trank1Q8BV79 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.2■□□□□ 0.02
Trank1Q8BV79 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trank1Q8BV79 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.2■□□□□ 0.02
Trank1Q8BV79 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Gm37935-201ENSMUST00000192012 982 ntBASIC15.19■□□□□ 0.02
Trank1Q8BV79 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trank1Q8BV79 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms