Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm13401-201ENSMUST00000117074 291 ntBASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap1Q8BTW8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm12085-201ENSMUST00000119263 940 ntBASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm9987-201ENSMUST00000069768 567 ntBASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdk5rap1Q8BTW8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap1Q8BTW8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdk5rap1Q8BTW8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Cdk5rap1Q8BTW8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdk5rap1Q8BTW8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdk5rap1Q8BTW8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm11539-201ENSMUST00000119837 557 ntBASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm13436-201ENSMUST00000120418 567 ntBASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm13559-201ENSMUST00000120476 863 ntBASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm38027-201ENSMUST00000192315 235 ntBASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk5rap1Q8BTW8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk5rap1Q8BTW8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms