Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Mir5130-201ENSMUST00000175160 84 ntBASIC17.81■□□□□ 0.44
Slc43a1Q8BSM7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc43a1Q8BSM7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc43a1Q8BSM7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc43a1Q8BSM7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc43a1Q8BSM7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc43a1Q8BSM7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Gm10013-201ENSMUST00000106074 672 ntBASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc43a1Q8BSM7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc43a1Q8BSM7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc43a1Q8BSM7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Gm7638-201ENSMUST00000121348 967 ntBASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc43a1Q8BSM7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc43a1Q8BSM7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc43a1Q8BSM7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Gm18032-201ENSMUST00000222541 538 ntBASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc43a1Q8BSM7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc43a1Q8BSM7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Slc43a1Q8BSM7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Slc43a1Q8BSM7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc43a1Q8BSM7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms