Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Mir8112-201ENSMUST00000184382 131 ntBASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ppp1r3eQ8BRJ4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ppp1r3eQ8BRJ4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Nespas-201ENSMUST00000143738 1083 ntBASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 AV356131-201ENSMUST00000206201 750 ntBASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ppp1r3eQ8BRJ4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ppp1r3eQ8BRJ4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ppp1r3eQ8BRJ4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Gm42778-201ENSMUST00000199644 553 ntBASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ppp1r3eQ8BRJ4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ppp1r3eQ8BRJ4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms