Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Gm22325-201ENSMUST00000158904 308 ntBASIC18.1■□□□□ 0.49
Suds3Q8BR65 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Suds3Q8BR65 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Suds3Q8BR65 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Suds3Q8BR65 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Suds3Q8BR65 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Gm27275-201ENSMUST00000184318 272 ntBASIC18.08■□□□□ 0.48
Suds3Q8BR65 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Suds3Q8BR65 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Gm12896-201ENSMUST00000118430 226 ntBASIC18.07■□□□□ 0.48
Suds3Q8BR65 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Suds3Q8BR65 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.07■□□□□ 0.48
Suds3Q8BR65 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Suds3Q8BR65 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Trmt13-210ENSMUST00000198454 880 ntBASIC18.06■□□□□ 0.48
Suds3Q8BR65 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Suds3Q8BR65 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Gm37856-201ENSMUST00000191634 999 ntBASIC18.05■□□□□ 0.48
Suds3Q8BR65 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.05■□□□□ 0.48
Suds3Q8BR65 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Suds3Q8BR65 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms