Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc3Q8BPK2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc3Q8BPK2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc3Q8BPK2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Zcchc3Q8BPK2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc3Q8BPK2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc3Q8BPK2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Gm11927-201ENSMUST00000118472 759 ntBASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Gm4968-201ENSMUST00000071458 858 ntBASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc3Q8BPK2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Gm2559-201ENSMUST00000201323 363 ntBASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Zcchc3Q8BPK2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zcchc3Q8BPK2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Zcchc3Q8BPK2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zcchc3Q8BPK2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.54■□□□□ 0.24
Zcchc3Q8BPK2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms