Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.41■□□□□ 0.06
Cdhr3Q8BL00 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Gm18671-201ENSMUST00000214826 683 ntBASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdhr3Q8BL00 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cdhr3Q8BL00 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdhr3Q8BL00 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdhr3Q8BL00 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms