Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SynbQ8BI41 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.8■□□□□ 0.28
SynbQ8BI41 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SynbQ8BI41 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SynbQ8BI41 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SynbQ8BI41 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SynbQ8BI41 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SynbQ8BI41 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SynbQ8BI41 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.79■□□□□ 0.28
SynbQ8BI41 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.79■□□□□ 0.28
SynbQ8BI41 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SynbQ8BI41 Gm43183-201ENSMUST00000200632 547 ntBASIC16.79■□□□□ 0.28
SynbQ8BI41 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SynbQ8BI41 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.79■□□□□ 0.28
SynbQ8BI41 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.78■□□□□ 0.28
SynbQ8BI41 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SynbQ8BI41 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.78■□□□□ 0.28
SynbQ8BI41 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SynbQ8BI41 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynbQ8BI41 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.78■□□□□ 0.28
SynbQ8BI41 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.77■□□□□ 0.28
SynbQ8BI41 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.77■□□□□ 0.28
SynbQ8BI41 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.77■□□□□ 0.28
SynbQ8BI41 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SynbQ8BI41 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Mtag2-201ENSMUST00000058665 714 ntBASIC16.77■□□□□ 0.28
SynbQ8BI41 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SynbQ8BI41 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SynbQ8BI41 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SynbQ8BI41 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SynbQ8BI41 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SynbQ8BI41 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SynbQ8BI41 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SynbQ8BI41 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SynbQ8BI41 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SynbQ8BI41 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.76■□□□□ 0.27
SynbQ8BI41 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.76■□□□□ 0.27
SynbQ8BI41 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SynbQ8BI41 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynbQ8BI41 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SynbQ8BI41 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.75■□□□□ 0.27
SynbQ8BI41 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.75■□□□□ 0.27
SynbQ8BI41 Gm30025-201ENSMUST00000218555 728 ntBASIC16.75■□□□□ 0.27
SynbQ8BI41 Gm18025-201ENSMUST00000221733 862 ntBASIC16.75■□□□□ 0.27
SynbQ8BI41 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynbQ8BI41 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynbQ8BI41 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SynbQ8BI41 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms