Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smndc1Q8BGT7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smndc1Q8BGT7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 AV356131-201ENSMUST00000206201 750 ntBASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smndc1Q8BGT7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smndc1Q8BGT7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.08■□□□□ 0.33
Smndc1Q8BGT7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smndc1Q8BGT7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smndc1Q8BGT7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smndc1Q8BGT7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smndc1Q8BGT7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smndc1Q8BGT7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms