Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Trim6Q8BGE7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Gm22325-201ENSMUST00000158904 308 ntBASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim6Q8BGE7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim6Q8BGE7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim6Q8BGE7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim6Q8BGE7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms