Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim50Q810I2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim50Q810I2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.2■□□□□ 0.34
Trim50Q810I2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim50Q810I2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim50Q810I2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Gm10138-203ENSMUST00000206952 366 ntBASIC17.19■□□□□ 0.34
Trim50Q810I2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim50Q810I2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim50Q810I2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim50Q810I2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim50Q810I2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim50Q810I2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Trim50Q810I2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim50Q810I2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim50Q810I2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Gm13158-201ENSMUST00000122007 736 ntBASIC17.18■□□□□ 0.34
Trim50Q810I2 Gm27011-201ENSMUST00000182352 972 ntBASIC17.18■□□□□ 0.34
Trim50Q810I2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.18■□□□□ 0.34
Trim50Q810I2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim50Q810I2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.17■□□□□ 0.34
Trim50Q810I2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.17■□□□□ 0.34
Trim50Q810I2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.17■□□□□ 0.34
Trim50Q810I2 Idnk-204ENSMUST00000226010 1898 ntBASIC17.17■□□□□ 0.34
Trim50Q810I2 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.17■□□□□ 0.34
Trim50Q810I2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim50Q810I2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim50Q810I2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim50Q810I2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim50Q810I2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Gm15375-201ENSMUST00000119510 849 ntBASIC17.16■□□□□ 0.34
Trim50Q810I2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim50Q810I2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.16■□□□□ 0.34
Trim50Q810I2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Trim50Q810I2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim50Q810I2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim50Q810I2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim50Q810I2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms