Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zc3hc1Q80YV2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.16■□□□□ 0.18
Zc3hc1Q80YV2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3hc1Q80YV2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3hc1Q80YV2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3hc1Q80YV2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Zc3hc1Q80YV2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.11■□□□□ 0.17
Zc3hc1Q80YV2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms