Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Gm45058-201ENSMUST00000205810 766 ntBASIC16.82■□□□□ 0.28
Vrk1Q80X41 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.82■□□□□ 0.28
Vrk1Q80X41 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.81■□□□□ 0.28
Vrk1Q80X41 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.81■□□□□ 0.28
Vrk1Q80X41 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.81■□□□□ 0.28
Vrk1Q80X41 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.81■□□□□ 0.28
Vrk1Q80X41 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Vrk1Q80X41 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.8■□□□□ 0.28
Vrk1Q80X41 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vrk1Q80X41 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Gm4974-201ENSMUST00000209974 875 ntBASIC16.79■□□□□ 0.28
Vrk1Q80X41 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Gm7367-201ENSMUST00000057611 492 ntBASIC16.79■□□□□ 0.28
Vrk1Q80X41 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vrk1Q80X41 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vrk1Q80X41 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Gm2274-201ENSMUST00000184539 609 ntBASIC16.78■□□□□ 0.28
Vrk1Q80X41 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Vrk1Q80X41 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.78■□□□□ 0.28
Vrk1Q80X41 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.78■□□□□ 0.28
Vrk1Q80X41 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vrk1Q80X41 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Vrk1Q80X41 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.77■□□□□ 0.28
Vrk1Q80X41 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vrk1Q80X41 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vrk1Q80X41 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vrk1Q80X41 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vrk1Q80X41 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.77■□□□□ 0.28
Vrk1Q80X41 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Vrk1Q80X41 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms