Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Gm13836-201ENSMUST00000121159 501 ntBASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm3Q80WV7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm3Q80WV7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Idnk-204ENSMUST00000226010 1898 ntBASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.35■□□□□ 0.53
Srrm3Q80WV7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srrm3Q80WV7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Srrm3Q80WV7 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.33■□□□□ 0.53
Srrm3Q80WV7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Srrm3Q80WV7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Srrm3Q80WV7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Srrm3Q80WV7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Srrm3Q80WV7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Srrm3Q80WV7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Srrm3Q80WV7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Srrm3Q80WV7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srrm3Q80WV7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Srrm3Q80WV7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srrm3Q80WV7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srrm3Q80WV7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srrm3Q80WV7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.32■□□□□ 0.52
Srrm3Q80WV7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srrm3Q80WV7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srrm3Q80WV7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srrm3Q80WV7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Srrm3Q80WV7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srrm3Q80WV7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms