Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.06■□□□□ 0.32
Trim36Q80WG7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Fst-202ENSMUST00000223640 2612 ntBASIC17.06■□□□□ 0.32
Trim36Q80WG7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.06■□□□□ 0.32
Trim36Q80WG7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim36Q80WG7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.05■□□□□ 0.32
Trim36Q80WG7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Gm5408-201ENSMUST00000197998 747 ntBASIC17.05■□□□□ 0.32
Trim36Q80WG7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim36Q80WG7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim36Q80WG7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.04■□□□□ 0.32
Trim36Q80WG7 Gm6211-202ENSMUST00000167849 925 ntBASIC17.04■□□□□ 0.32
Trim36Q80WG7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.04■□□□□ 0.32
Trim36Q80WG7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim36Q80WG7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim36Q80WG7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim36Q80WG7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim36Q80WG7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim36Q80WG7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim36Q80WG7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.02■□□□□ 0.32
Trim36Q80WG7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.02■□□□□ 0.32
Trim36Q80WG7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim36Q80WG7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim36Q80WG7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.01■□□□□ 0.31
Trim36Q80WG7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim36Q80WG7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.01■□□□□ 0.31
Trim36Q80WG7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms