Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim62Q80V85 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Trim62Q80V85 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Gm4974-201ENSMUST00000209974 875 ntBASIC18.27■□□□□ 0.52
Trim62Q80V85 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim62Q80V85 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.27■□□□□ 0.51
Trim62Q80V85 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim62Q80V85 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim62Q80V85 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim62Q80V85 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.26■□□□□ 0.51
Trim62Q80V85 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Trim62Q80V85 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.26■□□□□ 0.51
Trim62Q80V85 Gm8969-201ENSMUST00000199694 526 ntBASIC18.26■□□□□ 0.51
Trim62Q80V85 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.26■□□□□ 0.51
Trim62Q80V85 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim62Q80V85 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim62Q80V85 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim62Q80V85 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.26■□□□□ 0.51
Trim62Q80V85 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trim62Q80V85 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim62Q80V85 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim62Q80V85 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim62Q80V85 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim62Q80V85 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim62Q80V85 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim62Q80V85 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim62Q80V85 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim62Q80V85 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim62Q80V85 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim62Q80V85 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim62Q80V85 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim62Q80V85 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Gm715-201ENSMUST00000117865 831 ntBASIC18.23■□□□□ 0.51
Trim62Q80V85 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Trim62Q80V85 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim62Q80V85 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim62Q80V85 Gm10517-202ENSMUST00000192970 758 ntBASIC18.23■□□□□ 0.51
Trim62Q80V85 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim62Q80V85 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim62Q80V85 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trim62Q80V85 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim62Q80V85 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.22■□□□□ 0.51
Trim62Q80V85 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim62Q80V85 Mir8112-201ENSMUST00000184382 131 ntBASIC18.22■□□□□ 0.51
Trim62Q80V85 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.22■□□□□ 0.51
Trim62Q80V85 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms