Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp8Q80U87 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp8Q80U87 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Gm7290-201ENSMUST00000104990 617 ntBASIC17.68■□□□□ 0.42
Usp8Q80U87 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Gm12918-201ENSMUST00000120234 636 ntBASIC17.68■□□□□ 0.42
Usp8Q80U87 Gm15710-201ENSMUST00000121821 636 ntBASIC17.68■□□□□ 0.42
Usp8Q80U87 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.68■□□□□ 0.42
Usp8Q80U87 Gm5075-201ENSMUST00000196916 622 ntBASIC17.68■□□□□ 0.42
Usp8Q80U87 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp8Q80U87 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp8Q80U87 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Usp8Q80U87 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.68■□□□□ 0.42
Usp8Q80U87 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.68■□□□□ 0.42
Usp8Q80U87 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Usp8Q80U87 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp8Q80U87 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Usp8Q80U87 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Gm6365-201ENSMUST00000054711 744 ntBASIC17.67■□□□□ 0.42
Usp8Q80U87 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp8Q80U87 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.67■□□□□ 0.42
Usp8Q80U87 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp8Q80U87 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.67■□□□□ 0.42
Usp8Q80U87 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp8Q80U87 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Usp8Q80U87 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp8Q80U87 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Usp8Q80U87 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp8Q80U87 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.66■□□□□ 0.42
Usp8Q80U87 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp8Q80U87 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp8Q80U87 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp8Q80U87 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Usp8Q80U87 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp8Q80U87 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp8Q80U87 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp8Q80U87 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp8Q80U87 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp8Q80U87 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp8Q80U87 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.64■□□□□ 0.42
Usp8Q80U87 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp8Q80U87 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Usp8Q80U87 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp8Q80U87 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Gm6211-202ENSMUST00000167849 925 ntBASIC17.64■□□□□ 0.41
Usp8Q80U87 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp8Q80U87 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp8Q80U87 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp8Q80U87 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms