Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1gQ80T11 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ush1gQ80T11 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1gQ80T11 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1gQ80T11 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Ush1gQ80T11 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1gQ80T11 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1gQ80T11 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Ush1gQ80T11 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Gm23634-201ENSMUST00000175071 91 ntBASIC19.28■□□□□ 0.68
Ush1gQ80T11 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.28■□□□□ 0.68
Ush1gQ80T11 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1gQ80T11 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1gQ80T11 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ush1gQ80T11 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ush1gQ80T11 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.26■□□□□ 0.67
Ush1gQ80T11 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1gQ80T11 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Gm45058-201ENSMUST00000205810 766 ntBASIC19.25■□□□□ 0.67
Ush1gQ80T11 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.25■□□□□ 0.67
Ush1gQ80T11 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ush1gQ80T11 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ush1gQ80T11 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ush1gQ80T11 AA414768-201ENSMUST00000121924 1257 ntBASIC19.24■□□□□ 0.67
Ush1gQ80T11 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.24■□□□□ 0.67
Ush1gQ80T11 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1gQ80T11 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.23■□□□□ 0.67
Ush1gQ80T11 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1gQ80T11 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ush1gQ80T11 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1gQ80T11 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1gQ80T11 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1gQ80T11 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Ush1gQ80T11 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1gQ80T11 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms