Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3d21Q7TSG5 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.33■□□□□ 0.69
Sh3d21Q7TSG5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3d21Q7TSG5 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.33■□□□□ 0.69
Sh3d21Q7TSG5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.33■□□□□ 0.69
Sh3d21Q7TSG5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sh3d21Q7TSG5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3d21Q7TSG5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Trmt13-210ENSMUST00000198454 880 ntBASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3d21Q7TSG5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3d21Q7TSG5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Gm12527-201ENSMUST00000117967 564 ntBASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sh3d21Q7TSG5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Gm13158-201ENSMUST00000122007 736 ntBASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Gm37856-201ENSMUST00000191634 999 ntBASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3d21Q7TSG5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Gm10138-203ENSMUST00000206952 366 ntBASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.27■□□□□ 0.68
Sh3d21Q7TSG5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms