Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn4bQ7M729 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn4bQ7M729 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.17■□□□□ 0.34
Scn4bQ7M729 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn4bQ7M729 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scn4bQ7M729 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Mir2861-201ENSMUST00000175539 82 ntBASIC17.16■□□□□ 0.34
Scn4bQ7M729 Gm29791-202ENSMUST00000207888 369 ntBASIC17.16■□□□□ 0.34
Scn4bQ7M729 Gm20049-201ENSMUST00000219950 730 ntBASIC17.16■□□□□ 0.34
Scn4bQ7M729 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn4bQ7M729 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Gm11249-201ENSMUST00000117071 859 ntBASIC17.15■□□□□ 0.34
Scn4bQ7M729 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Gm8969-201ENSMUST00000199694 526 ntBASIC17.15■□□□□ 0.34
Scn4bQ7M729 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn4bQ7M729 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn4bQ7M729 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Scn4bQ7M729 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn4bQ7M729 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn4bQ7M729 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.14■□□□□ 0.33
Scn4bQ7M729 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn4bQ7M729 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn4bQ7M729 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.14■□□□□ 0.33
Scn4bQ7M729 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms