Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubfd1Q78JW9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubfd1Q78JW9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubfd1Q78JW9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubfd1Q78JW9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubfd1Q78JW9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ubfd1Q78JW9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Gm10231-201ENSMUST00000181584 441 ntBASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Gm10175-202ENSMUST00000208752 441 ntBASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubfd1Q78JW9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms