Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.26■□□□□ 0.51
Cspg5Q71M36 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.26■□□□□ 0.51
Cspg5Q71M36 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.26■□□□□ 0.51
Cspg5Q71M36 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg5Q71M36 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.25■□□□□ 0.51
Cspg5Q71M36 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg5Q71M36 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Gm15375-201ENSMUST00000119510 849 ntBASIC18.24■□□□□ 0.51
Cspg5Q71M36 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Gm10138-203ENSMUST00000206952 366 ntBASIC18.24■□□□□ 0.51
Cspg5Q71M36 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Zfp783-201ENSMUST00000095946 670 ntBASIC18.24■□□□□ 0.51
Cspg5Q71M36 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.24■□□□□ 0.51
Cspg5Q71M36 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg5Q71M36 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cspg5Q71M36 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.22■□□□□ 0.51
Cspg5Q71M36 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg5Q71M36 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Gm37292-201ENSMUST00000192062 758 ntBASIC18.21■□□□□ 0.51
Cspg5Q71M36 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cspg5Q71M36 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Cspg5Q71M36 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cspg5Q71M36 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms