Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssx9Q6XAS3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssx9Q6XAS3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ssx9Q6XAS3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ssx9Q6XAS3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssx9Q6XAS3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ssx9Q6XAS3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssx9Q6XAS3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssx9Q6XAS3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Gm5408-201ENSMUST00000197998 747 ntBASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssx9Q6XAS3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssx9Q6XAS3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssx9Q6XAS3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms